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Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
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Home BLAST Prediction RegMap ATRM Download Help About Links |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OPUNC03G09580.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 433aa MW: 47020.8 Da PI: 10.3114 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 63.5 | 4.1e-20 | 349 | 411 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkr++rkq+NRe+ArrsR+RK+ae ee +++++ L++eN++Lk+el++l++++ +l+se+ OPUNC03G09580.2 349 ERELKRQKRKQSNRESARRSRLRKQAEWEEVANRADLLKQENSSLKEELKQLQEKCNSLTSEN 411 89***********************************************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF07777 | 4.0E-27 | 60 | 155 | IPR012900 | G-box binding protein, multifunctional mosaic region |
Pfam | PF16596 | 7.6E-7 | 194 | 317 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 3.3E-15 | 344 | 407 | No hit | No description |
Pfam | PF00170 | 8.5E-18 | 349 | 411 | IPR004827 | Basic-leucine zipper domain |
SMART | SM00338 | 1.0E-19 | 349 | 413 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 12.587 | 351 | 414 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.56E-9 | 352 | 408 | No hit | No description |
CDD | cd14702 | 1.92E-20 | 354 | 405 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 356 | 371 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 433 aa Download sequence Send to blast |
MRHASPRRAP KFPKSKSSPI RGPPPAGASG AASPLAAPRL CWIGAEWRSV RERFSLPPRE 60 VATRSKSQKS SATQNEQSTP TNPPTAYPDW SQFQAYYNPA GTAPMTPPGF FHPNVTPSPQ 120 GHPYMWGPQM MPPYGTPPPY AAMYAQGTPY QQAPMLPGSH PYNPYPGQSP NGTVQTPTSA 180 GGTETDKSSK SKRKTPLKRS KGSLGNLDVV ATKNKKAPAK PSASSSNEVR VEVEVLLKEA 240 AQIPKGSRTK DGSEHGQGND ASNKGATAQS SAVEPVQAST GPVVLNPMMP YWPVPPPMAG 300 PATGVNMGMD YWGTPTSVPM HNKVIAAPAS APSSNSRDVV LSDPAIQDER ELKRQKRKQS 360 NRESARRSRL RKQAEWEEVA NRADLLKQEN SSLKEELKQL QEKCNSLTSE NTTLHEKLKE 420 LEGEKSNGNW YKE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 365 | 371 | RRSRLRK |
2 | 365 | 372 | RRSRLRKQ |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK066563 | 0.0 | AK066563.1 Oryza sativa Japonica Group cDNA clone:J013071G08, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015632857.1 | 0.0 | PREDICTED: transcription factor HBP-1a isoform X1 | ||||
Refseq | XP_015632858.1 | 0.0 | PREDICTED: transcription factor HBP-1a isoform X1 | ||||
Refseq | XP_015632859.1 | 0.0 | PREDICTED: transcription factor HBP-1a isoform X1 | ||||
Refseq | XP_015632860.1 | 0.0 | PREDICTED: transcription factor HBP-1a isoform X1 | ||||
Refseq | XP_015632861.1 | 0.0 | PREDICTED: transcription factor HBP-1a isoform X1 | ||||
TrEMBL | A0A0E0KB29 | 0.0 | A0A0E0KB29_ORYPU; Uncharacterized protein | ||||
STRING | LOC_Os03g13614.1 | 0.0 | (Oryza sativa Japonica Group) | ||||
STRING | BGIOSGA011142-PA | 0.0 | (Oryza sativa Indica Group) | ||||
STRING | ORGLA03G0095800.1 | 0.0 | (Oryza glaberrima) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G35530.1 | 8e-55 | basic region/leucine zipper transcription factor 16 |